Spike2 Scripts
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The Crab-Analyser
by
Mark Beenhakker (markbeen@stanford.edu) and Wolfgang Stein (wstein @ neurobiologie.de)
Window Discriminator
by Wolfgang Stein (wstein @ neurobiologie.de)
Window Discriminator and Phase Calculation
by Wolfgang Stein (wstein @ neurobiologie.de)
PSTH from Events
by Wolfgang Stein (wstein @ neurobiologie.de)
Data Analysis for Pulse Protocol, PSTH
by Wolfgang Stein (wstein @ neurobiologie.de)
Very long PSTH (counts Events)
by Wolfgang Stein (wstein @ neurobiologie.de)
Make Sound from Recording
by unknown (wstein@neurobiologie.de)
Stick Insect vel + pos
by Wolfgang Stein (wstein @ neurobiologie.de)
ASC File to Eventchannel
by Wolfgang Stein (wstein @ neurobiologie.de)
Bigify extracellular spikes for analysis
by Wolfgang Stein (wstein @ neurobiologie.de)
PD Stimulation Sequencer I (easy)
by Wolfgang Stein (wstein @ neurobiologie.de)
PD Stimulation Sequencer II
by Wolfgang Stein (wstein @ neurobiologie.de) and
Mark Beenhakker (markbeen@stanford.edu)
Control Script for Stimulation Sequencer
by
Mark Beenhakker (markbeen@stanford.edu)
and Wolfgang Stein (wstein @ neurobiologie.de)
Script for inverting waveform channels
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for deleting parts of a waveform channel
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for adding / deleting text to/from keyboard channel
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for finding EPSPs in Neurons
by Wolfgang Stein (wstein @ neurobiologie.de) and
Tina Eberle (tina@neurobiologie.de)
Script for making PSTH from different channels
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for converting events to sequencer output
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for creating stimulus trains
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for measuring amplitude of EPSPs
by Wolfgang Stein (wstein @ neurobiologie.de)
Script for pulsing with different amplitudes
by Wolfgang Stein (wstein @ neurobiologie.de)
Sequencer file for pulse script
by Wolfgang Stein (wstein @ neurobiologie.de)
Delete Channels and smallerize data file
by Wolfgang Stein (wstein @ neurobiologie.de)
Delete part of a Channel with triggers, goal:smallerize data file
by Wolfgang Stein (wstein @ neurobiologie.de)
create a sinewave for sequencer + electrical pulse
by Wolfgang Stein (wstein @ neurobiologie.de)
stimulate neuron (PD) rhythmically, entrain rhythm
by Wolfgang Stein (wstein @ neurobiologie.de)
train stimulation for DIGOUT port
by Wolfgang Stein (wstein @ neurobiologie.de)
tonic stimulation with pause for DIGOUT port
by Wolfgang Stein (wstein @ neurobiologie.de)
dump asc from waveform data file
by Wolfgang Stein (wstein @ neurobiologie.de)
combines DIGOUT train stimulation and neuron stimulation (PD)
by Wolfgang Stein (wstein @ neurobiologie.de)
subtract waveform channel from another
by Wolfgang Stein (wstein @ neurobiologie.de)
copy waveform channel from one file to another
by Wolfgang Stein (wstein @ neurobiologie.de)
pseudo-empty data file (600sec)
by Wolfgang Stein (wstein @ neurobiologie.de)
find specific PSPs in an intracellular trace
by Wolfgang Stein (wstein @ neurobiologie.de)
Remove artifacts from intra or extracellular recordings
by Wolfgang Stein (wstein @ neurobiologie.de)
various rhythmic stimulations of neuron
by Wolfgang Stein (wstein @ neurobiologie.de) and Carmen Smarandache (carmen @ neurobiologie.de)
ASC dump with trigger channel
by Wolfgang Stein (wstein @ neurobiologie.de)
find peaks and troughs (of EJPs) in waveform channel
by Wolfgang Stein (wstein @ neurobiologie.de)
find spikes in extracellular recording
by Wolfgang Stein (wstein @ neurobiologie.de) and Farzan Nadim (farzan @ cancer.rutgers.edu)
Window discriminator for spikes
by Wolfgang Stein (wstein @ neurobiologie.de)
Leak subtraction with dynamic clamp
by Wolfgang Stein (wstein @ neurobiologie.de)
muscle stimulation (EJPs)
by Wolfgang Stein (wstein @ neurobiologie.de)
Stim a neuron during bursts of another (during sampling)
by Wolfgang Stein (wstein @ neurobiologie.de)
Identify same neuron on 2 recordings acc. to time delay
by Wolfgang Stein (wstein @ neurobiologie.de)
find bursts in an extracellular recording and copy events to clipboard (for stick insects)
by Wolfgang Stein (wstein @ neurobiologie.de)
find bursts in an extracellular recording and copy burstduration to clipboard (for stick insects)
by Wolfgang Stein (wstein @ neurobiologie.de)
find bursts and measure burstduration, spikefrequency and spikenumber
by Wolfgang Stein (wstein @ neurobiologie.de) and Carmen Smarandache (carmen @ neurobiologie.de)
Fit exponential function to series of EJPs
by Wolfgang Stein (wstein @ neurobiologie.de)
Fit exponential function to series of EJPs (copies only timeconstant to clipboard)
by Wolfgang Stein (wstein @ neurobiologie.de)
Identify spikes on extracell. recording by direction of amplitude peak
by Wolfgang Stein (wstein @ neurobiologie.de)
online spike detection by threshold and output of 5V pulse when spike is detected
by Wolfgang Stein (wstein @ neurobiologie.de)
advanced phase analysis with spike activities + firing frequencies
by Wolfgang Stein (wstein @ neurobiologie.de)
all-in-one tool for measuring locust flight cycle period in closed-loop condition
by Wolfgang Stein (wstein @ neurobiologie.de)
Multisweep (XY Plot) of recordings
by Wolfgang Stein (wstein @ neurobiologie.de)
Create event channel (trigger) from waveform channel - enhanced version with Spike-peak detection
by Wolfgang Stein (wstein @ neurobiologie.de)
Convert an event channel to a waveform (inst. frequency plot)
by Wolfgang Stein (wstein @ neurobiologie.de)
Plot a phase diagram
by Wolfgang Stein (wstein @ neurobiologie.de)
Link to Dirk Bucher's Script files
Scripts are provided without support!