** 2021 **

 

Collias D, Beisel CL (2021) CRISPR technologies and the search for the PAM-free nuclease. Nat Commun, 12, 555. DOI: 10.1038/s41467-020-20633-y

Collins SP, Rostain W, Liao C, Beisel CL (2021) Sequence-independent RNA sensing and DNA targeting by a split domain CRISPR-Cas12a gRNA switch. Nucleic Acids Res, 49, 2985-2999. DOI: 10.1093/nar/gkab100

Donati S, Kuntz M, Pahl V, Farke N, Beuter D, Glatter T, Gomes-Filho JV, Randau L, Wang C-Y, Link H (2021) Multi-omics analysis of CRISPRi-knockdowns identifies mechanisms that buffer decreases of enzymes in E. coli metabolism. Cell Syst, 12, 56-67. DOI: 10.1016/j.cels.2020.10.011.

Jiao C, Sharma S, Dugar G, Peeck NL, Bischler T, Wimmer F, Yu Y, Barquist L, Schoen C, Kurzai O, Sharma CM, Beisel CL (2021) Noncanonical crRNAs derived from host transcripts enable multiplexable RNA detection by Cas9. Science, Epub ahead of print. DOI: 10.1126/science.abe7106.

Lu W-T, Trost CN, Müller-Esparza H, Randau L, Davidson AR (2021) Anti-CRISPR AcrIF9 functions by inducing the CRISPR-Cas complex to bind DNA non-specifically. Nucleic Acids Res, 49, 3381-3393. DOI: 10.1093/nar/gkab092.

Märkle P, Maier LK, Maaß S, Hirschfeld C, Bartel J, Becher D, Voß B, Marchfelder A (2021) A Small RNA Is Linking CRISPR–Cas and Zinc Transport. Front Mol Biosci, 8:640440. DOI: 10.3389/fmolb.2021.640440 

Mitrofanov A, Alkhnbashi OS, Shmakov SA, Makarova KS, Koonin EV, Backofen R (2021) CRISPRidentify: identification of CRISPR arrays using machine learning approach. Nucleic Acids Res, 49, e20. DOI: 10.1093/nar/gkaa1158.

Mougiakos I, Beisel CL (2021) CRISPR transposons on the move. Cell Host Microbe, 29,675-677. DOI: 10.1016/j.chom.2021.04.012.

Münch PC, Franzosa EA, Stecher B, McHardy AC, Huttenhower C (2021) Identification of Natural CRISPR Systems and Targets in the Human Microbiome. Cell Host Microbe, 29, 94-106.e4. DOI: 10.1016/j.chom.2020.10.010.

Riediger M, Spät P, Bilger R, Voigt K, Macek B, Hess WR (2021) Analysis of a photosynthetic cyanobacterium rich in internal membrane systems via gradient profiling by sequencing (Grad-seq). Plant Cell, Epub ahead of press. DOI: 10.1093/plcell/koaa017

Sharma, S and Sharma, CM (2021) Identification of RNA binding partners of CRISPR-Cas proteins in prokaryotes using RIP-seq. Post-transcriptional Gene Regulation, 3rd Edition - Methods in Molecular Biology, Springer, (in press).